bioconductor-aims

downloads

This package contains the AIMS implementation. It contains necessary functions to assign the five intrinsic molecular subtypes (Luminal A, Luminal B, Her2-enriched, Basal-like, Normal-like). Assignments could be done on individual samples as well as on dataset of gene expression data.

Home http://bioconductor.org/packages/3.6/bioc/html/AIMS.html
Versions 1.10.0, 1.8.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-aims

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-aims

and update with:

conda update bioconductor-aims

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-aims.