recipe bioconductor-aims

AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype

Homepage

https://bioconductor.org/packages/3.11/bioc/html/AIMS.html

License

Artistic-2.0

Recipe

/bioconductor-aims/meta.yaml

Links

biotools: aims, doi: 10.1093/jnci/dju357

This package contains the AIMS implementation. It contains necessary functions to assign the five intrinsic molecular subtypes (Luminal A, Luminal B, Her2-enriched, Basal-like, Normal-like). Assignments could be done on individual samples as well as on dataset of gene expression data.

package bioconductor-aims

(downloads) docker_bioconductor-aims

Versions

1.20.0-01.18.0-01.16.0-11.14.1-01.14.0-01.12.0-01.10.0-01.8.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-aims

and update with:

conda update bioconductor-aims

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-aims:<tag>

(see bioconductor-aims/tags for valid values for <tag>)