recipe bioconductor-baynorm

bayNorm is used for normalizing single-cell RNA-seq data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/bayNorm.html

License

GPL (>= 2)

Recipe

/bioconductor-baynorm/meta.yaml

package bioconductor-baynorm

(downloads) docker_bioconductor-baynorm

Versions

1.0.6-0

Depends bioconductor-biocparallel

>=1.16.0,<1.17.0

Depends bioconductor-singlecellexperiment

>=1.4.0,<1.5.0

Depends bioconductor-summarizedexperiment

>=1.12.0,<1.13.0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-bb

Depends r-dosnow

Depends r-fitdistrplus

Depends r-foreach

Depends r-iterators

Depends r-locfit

Depends r-mass

Depends r-rcpp

>=0.12.12

Depends r-rcpparmadillo

Depends r-rcppprogress

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-baynorm

and update with:

conda update bioconductor-baynorm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-baynorm:<tag>

(see bioconductor-baynorm/tags for valid values for <tag>)