bioconductor-fgsea

downloads

The package implements an algorithm for fast gene set enrichment analysis. Using the fast algorithm allows to make more permutations and get more fine grained p-values, which allows to use accurate stantard approaches to multiple hypothesis correction.

Home http://bioconductor.org/packages/3.6/bioc/html/fgsea.html
Versions 1.2.1, 1.4.0
License MIT + file LICENCE
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-fgsea

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-fgsea

and update with:

conda update bioconductor-fgsea

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-fgsea.