- recipe bioconductor-gesper
Gene-Specific Phenotype EstimatoR
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/gespeR.html
- License
GPL-3
- Recipe
Estimates gene-specific phenotypes from off-target confounded RNAi screens. The phenotype of each siRNA is modeled based on on-targeted and off-targeted genes, using a regularized linear regression model.
- package bioconductor-gesper¶
-
- Versions
1.26.0-0
,1.24.0-0
,1.20.0-0
,1.18.0-0
,1.16.0-1
,1.14.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biomart
>=2.50.0,<2.51.0
bioconductor-cellhts2
>=2.58.0,<2.59.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gesper
and update with:
conda update bioconductor-gesper
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gesper:<tag>
(see bioconductor-gesper/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gesper/README.html)