bioconductor-htsfilter

downloads

This package implements a filtering procedure for replicated transcriptome sequencing data based on a global Jaccard similarity index in order to identify genes with low, constant levels of expression across one or more experimental conditions.

Home http://bioconductor.org/packages/3.7/bioc/html/HTSFilter.html
Versions 1.20.0, 1.18.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-htsfilter
Links biotools: htsfilter

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-htsfilter

and update with:

conda update bioconductor-htsfilter

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-htsfilter.