recipe bioconductor-redseq

Analysis of high-throughput sequencing data processed by restriction enzyme digestion

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/REDseq.html

License:

GPL (>=2)

Recipe:

/bioconductor-redseq/meta.yaml

The package includes functions to build restriction enzyme cut site (RECS) map, distribute mapped sequences on the map with five different approaches, find enriched/depleted RECSs for a sample, and identify differentially enriched/depleted RECSs between samples.

package bioconductor-redseq

(downloads) docker_bioconductor-redseq

Versions:

1.44.0-01.40.0-01.38.0-01.36.0-11.36.0-01.34.0-01.32.0-01.30.0-11.28.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-redseq

and update with:

conda update bioconductor-redseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-redseq:<tag>

(see bioconductor-redseq/tags for valid values for <tag>)

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