bioconductor-risa

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The Investigation / Study / Assay (ISA) tab-delimited format is a general purpose framework with which to collect and communicate complex metadata (i.e. sample characteristics, technologies used, type of measurements made) from experiments employing a combination of technologies, spanning from traditional approaches to high-throughput techniques. Risa allows to access metadata/data in ISA-Tab format and build Bioconductor data structures. Currently, data generated from microarray, flow cytometry and metabolomics-based (i.e. mass spectrometry) assays are supported. The package is extendable and efforts are undergoing to support metadata associated to proteomics assays.

Home http://bioconductor.org/packages/3.6/bioc/html/Risa.html
Versions 1.18.0, 1.20.0
License LGPL
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-risa

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-risa

and update with:

conda update bioconductor-risa

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-risa.