recipe bioconductor-rnaseqsamplesize

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data

Homepage

https://bioconductor.org/packages/3.9/bioc/html/RnaSeqSampleSize.html

License

GPL (>= 2)

Recipe

/bioconductor-rnaseqsamplesize/meta.yaml

package bioconductor-rnaseqsamplesize

(downloads) docker_bioconductor-rnaseqsamplesize

Versions

1.14.0-0, 1.12.0-2

Depends bioconductor-biomart

>=2.38.0,<2.39.0

Depends bioconductor-edger

>=3.24.0,<3.25.0

Depends bioconductor-keggrest

>=1.22.0,<1.23.0

Depends bioconductor-rnaseqsamplesizedata

>=1.14.0,<1.15.0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-heatmap3

Depends r-matlab

Depends r-rcpp

>=0.11.2

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rnaseqsamplesize

and update with:

conda update bioconductor-rnaseqsamplesize

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rnaseqsamplesize:<tag>

(see bioconductor-rnaseqsamplesize/tags for valid values for <tag>)