recipe delly

Structural variant discovery by integrated paired-end and split-read analysis

Homepage:

https://github.com/dellytools/delly

License:

BSD / BSD-3-Clause

Recipe:

/delly/meta.yaml

package delly

Versions:

1.1.6-2,  1.1.6-1,  1.1.6-0,  1.1.5-1,  1.1.5-0,  1.1.3-1,  1.1.3-0,  1.0.3-4,  1.0.3-3, 

1.1.6-2,  1.1.6-1,  1.1.6-0,  1.1.5-1,  1.1.5-0,  1.1.3-1,  1.1.3-0,  1.0.3-4,  1.0.3-3,  1.0.3-2,  1.0.3-1,  1.0.3-0,  0.9.1-4,  0.9.1-3,  0.9.1-2,  0.9.1-1,  0.9.1-0,  0.8.7-1,  0.8.7-0,  0.8.6-0,  0.8.5-0,  0.8.3-1,  0.8.3-0,  0.8.2-1,  0.8.2-0,  0.8.1-3,  0.8.1-2,  0.8.1-1,  0.8.1-0,  0.7.9-4,  0.7.8-4,  0.7.8-3,  0.7.8-2,  0.7.8-1,  0.7.8-0,  0.7.7-1,  0.7.6-0,  0.7.2-1,  0.7.2-0

Depends:

• boost-cpp >=1.78.0,<1.78.1.0a0

• bzip2 >=1.0.8,<2.0a0

• htslib >=1.17,<1.18.0a0

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• zlib

Required By:

• pathogen-profiler

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install delly

and update with:

conda update delly

or use the docker container:

docker pull quay.io/biocontainers/delly:<tag>

(see delly/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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